PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028122842.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 204aa MW: 23725.9 Da PI: 10.0327

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028122842.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.9	7.2e-23	42	127	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY+eYA++vGF +r+ +s+ks+r+g+i++r + C + +++++++ + ++r r gC+a++ vk+ek g+w+v k++ +HnH+l+ XP_028122842.1 42 FYDEYATRVGFVTRVLSSRKSERDGSIISRGLGCRASPENQNSERV---TLQKRDRRREGCTAMILVKREKPGRWVVRKFVRDHNHPLV 127 ********************************999999888777...78888999****************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 204 aa Download sequence
MDDEAGRIET SMGGELSSCE SHRNQEPYEG MLFDSEEAAR TFYDEYATRV GFVTRVLSSR 60 KSERDGSIIS RGLGCRASPE NQNSERVTLQ KRDRRREGCT AMILVKREKP GRWVVRKFVR 120 DHNHPLVVSL PNRRPTHDEK DKKIQELTAE LRVKKRLSGA YRDQLLSLMK DVENHNEHLS 180 TKVQVVRNNL KELEAKRKEL LLHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	3e-54	FAR1 family protein