PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028122857.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

DBB

Protein Properties

Length: 242aa MW: 26846.3 Da PI: 4.5272

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028122857.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.9	3.7e-07	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e+ +++ C ++ lC++C e H H++ XP_028122857.1 4 QCDVCEKAPATVICCADEAALCAKCDIEVHAAnklaskHQR 44 7*****************************65667777765 PP
2	zf-B_box	23.6	1.1e-07	53	87	2	36
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg 36 + + C+ ++ek + +fC +++ l+C+dC + +H XP_028122857.1 53 KLPPCDICQEKAAFIFCVEDRALFCRDCDEPIHCA 87 6789**************************99954 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
MKIQCDVCEK APATVICCAD EAALCAKCDI EVHAANKLAS KHQRLLLQSL SNKLPPCDIC 60 QEKAAFIFCV EDRALFCRDC DEPIHCASSL SANHQRFLAT GIRVALTSSC TKDSEKGNQE 120 PEPEPPNHNA QSVSIKMPTQ QSSSFTSPSW AVDDLLHLSD FESSDKKEQL EFGELEWFTD 180 IGLFGEQVPR EALALAEVPQ LPVPQLSNAT SYRPTKLNMP YKKPRIEISD EDDEYFTVPD 240 LG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06040.1	1e-102	DBB family protein