PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028122937.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 863aa MW: 99347.4 Da PI: 7.0839

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028122937.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.6	1e-23	186	272	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +Yn+YA GFs+rk+ +ks+ ng +++r+++C+k+g+r++++++ + +++r+ trtgC a++++ ++ +gk++vt++e+eHnHe+a XP_028122937.1 186 CYNRYAALEGFSIRKDFVNKSRVNGFVVSRRYTCYKQGYRSTKHDS--HVKKPRKDTRTGCLAHMTIARQANGKYRVTHFETEHNHEFA 272 7***************************************9988..9999*********************************96 PP
2	FAR1	87.8	1.6e-27	320	409	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYn+YA +vGFsvrk++ ++sk +g + +r+f+C +eg+r+++k++ + +r+r+etr+gC a+l++ ++ g+++vt++e++HnHel p XP_028122937.1 320 EFYNAYAGRVGFSVRKDYVNRSKVDGAVASRRFTCFREGFRQKHKRD-LNVKRPRKETRIGCLAQLVIARQPGGRYRVTHFEQKHNHELEP 409 6*****************************************999.9999**********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 863 aa Download sequence
MPLILKHSSL LESPSIYSLS SIRSMDGCEA DITSHPNEEE MVHISLLSSG LGIDVELECQ 60 SVKVSAADLN AIDIDGEQVC QSSKGSSVDK NGMNMDGEQQ WQSPDFSSVD KYVIDADDKH 120 KGHNLKVSSM DNPRIDVDSK QECQSLDDTL VGTPGSGHFS GKDEADRYVV PELGMVFESE 180 DHAYECYNRY AALEGFSIRK DFVNKSRVNG FVVSRRYTCY KQGYRSTKHD SHVKKPRKDT 240 RTGCLAHMTI ARQANGKYRV THFETEHNHE FATPFTANML PSQRRITFAQ AVEAELDNNC 300 VIEGVPKLGM GFDSEDHAYE FYNAYAGRVG FSVRKDYVNR SKVDGAVASR RFTCFREGFR 360 QKHKRDLNVK RPRKETRIGC LAQLVIARQP GGRYRVTHFE QKHNHELEPP CRIRMLRSQK 420 RSASEATATD DSGMQPKSAS DLISKPVGDG ESVGYRPIDY ESNLPARRMR DMKQGESESI 480 LQYFQNKQLK NPSFFYAVQL DAEGKMTNVF WSDAKMLVDY GDFGDVVCFD MTYKLNKDCR 540 PFAPFIGVNH HKQMVIFGAA LLYDDTVESF RWLFRTFLEM SKKKPKTILT DRDAVMAEAI 600 NSVLPEAHHR LCAWHVYQNA LKHLSQVIVG LDSFSNDLSS CIFNHDEEQD FVDAWKTMLD 660 MYGLWEDKWL DDIFREREKW AIPYGRHIFC ADIKSAQLSE SFNTTNFRKY LKSDLDVLQF 720 FKHFGRLVND WRYKELEANY DMSQRMPRLM GDVILLKRVR DVYTPKIFEL FQQEYENCLS 780 VVVNQCTENV PLFEYKVSIY RQVREYTVIF NSSEDSVVCS CMKFQADGVL CSHALKVLDY 840 RNIKVVPARY ILKRWTKDAR CYP

Sequence ? help Back to Top

Protein Sequence Length: 863 aa Download sequence

MPLILKHSSL LESPSIYSLS SIRSMDGCEA DITSHPNEEE MVHISLLSSG LGIDVELECQ  60
SVKVSAADLN AIDIDGEQVC QSSKGSSVDK NGMNMDGEQQ WQSPDFSSVD KYVIDADDKH  120
KGHNLKVSSM DNPRIDVDSK QECQSLDDTL VGTPGSGHFS GKDEADRYVV PELGMVFESE  180
DHAYECYNRY AALEGFSIRK DFVNKSRVNG FVVSRRYTCY KQGYRSTKHD SHVKKPRKDT  240
RTGCLAHMTI ARQANGKYRV THFETEHNHE FATPFTANML PSQRRITFAQ AVEAELDNNC  300
VIEGVPKLGM GFDSEDHAYE FYNAYAGRVG FSVRKDYVNR SKVDGAVASR RFTCFREGFR  360
QKHKRDLNVK RPRKETRIGC LAQLVIARQP GGRYRVTHFE QKHNHELEPP CRIRMLRSQK  420
RSASEATATD DSGMQPKSAS DLISKPVGDG ESVGYRPIDY ESNLPARRMR DMKQGESESI  480
LQYFQNKQLK NPSFFYAVQL DAEGKMTNVF WSDAKMLVDY GDFGDVVCFD MTYKLNKDCR  540
PFAPFIGVNH HKQMVIFGAA LLYDDTVESF RWLFRTFLEM SKKKPKTILT DRDAVMAEAI  600
NSVLPEAHHR LCAWHVYQNA LKHLSQVIVG LDSFSNDLSS CIFNHDEEQD FVDAWKTMLD  660
MYGLWEDKWL DDIFREREKW AIPYGRHIFC ADIKSAQLSE SFNTTNFRKY LKSDLDVLQF  720
FKHFGRLVND WRYKELEANY DMSQRMPRLM GDVILLKRVR DVYTPKIFEL FQQEYENCLS  780
VVVNQCTENV PLFEYKVSIY RQVREYTVIF NSSEDSVVCS CMKFQADGVL CSHALKVLDY  840
RNIKVVPARY ILKRWTKDAR CYP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-122	FAR1 family protein