PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028123105.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 325aa MW: 37166.9 Da PI: 6.7874

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028123105.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.5	9.2e-23	54	144	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 +fYn+Y+ +vGFs+++ + +k+k+++eit++tfvC+keg+r +k++ + +r+e r+gC a++ +k+++ gk++ ++++++HnH+l+p XP_028123105.1 54 DFYNTYGGKVGFSIKNLYAHKNKHTKEITSQTFVCYKEGTRGIDKRD-PLVQFPRQEVRCGCGARFSIKLDRnLGKYVAIDFVEHHNHDLVP 144 6*****************************************999.88899**************989*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MVDRGNGNGE RLAEGRESGC DEVIEENNVV NELANSGWKL KLGMSFDSKQ AAYDFYNTYG 60 GKVGFSIKNL YAHKNKHTKE ITSQTFVCYK EGTRGIDKRD PLVQFPRQEV RCGCGARFSI 120 KLDRNLGKYV AIDFVEHHNH DLVPQECIHM LPSQRKISTT QAIEVELASE SGIPLRSAYE 180 LFGRESGGRA SLGFTKLDQK NYLRSKRQKD LEYGEAGSVL QYFRKKSLEN LSFYYAIQLD 240 CEEQISNIFW ADAQMIMDYA QFGDVMTFDT TYKLNNEHRP FGTFVGFNHH RETVVFGASL 300 MYDETAKSFT WLFQIFLEAM SNKAP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-67	FAR1 family protein