PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028123107.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 320aa    MW: 36886.9 Da    PI: 7.9917
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028123107.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR186.15.5e-2725114190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fYn+Y+ ++GFs+r++  +k+k n++ ++r +vC+keg+r+ +k++   ++++raetrtgC+a+l vk+++ +gk++vt+++++HnH+l+
  XP_028123107.1  25 DFYNTYGGRMGFSIRRDFCRKNKINNQLICRLLVCNKEGFRKGDKRD-PLSKNPRAETRTGCEARLYVKLDEgTGKYVVTDFKEKHNHDLV 114
                     6*******************************************999.999**************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MEPENDCAWK PKQGMTFDSE QCVYDFYNTY GGRMGFSIRR DFCRKNKINN QLICRLLVCN  60
KEGFRKGDKR DPLSKNPRAE TRTGCEARLY VKLDEGTGKY VVTDFKEKHN HDLVSPECAH  120
MLPSQRKIST TQAIELDLAA QSGLRLGQSF ELMGREAGGR QCLGFTKLDQ KNYLRTKRQQ  180
SLAYGEVGNV LQYFKEKSLQ NPSFFYAFQL DNEEKITNMF WANAQMIMDY AQFGDVVTFD  240
TTYKLNKEHR PFTSFVGFNH HRETVIFGAA LLYDETAESF VWLFQNFLEA MSKNAPKTLF  300
TDQDAAMAKA IPIVMPDMSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-77FAR1 family protein