PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028123283.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 485aa MW: 55633.9 Da PI: 7.1601

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028123283.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.5	1.6e-21	92	185	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 fYn+YAk GFs+rks+ +++ ++g++++r + Cs+eg+r ++ + +ek+r ++a tr+gCka+++++ + g+++vt+++ +HnHela XP_028123283.1 92 FYNAYAKAKGFSIRKSRFNTN-KEGKVVSRLWLCSREGQRLPKYLDriAEKSRAPKALTRVGCKAQFRIRYDVdagkGGQYVVTHFVADHNHELA 185 9**************9999.666699999******99888889999*************99876666899***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MAPAEVKREG DDYDIPNEAD DIRLMNESWP EPYHGCEAGL SNEEATNMNV EDGGADVKKE 60 MVDDAHRNDM VGDVERAILE QKFDSVEDGE AFYNAYAKAK GFSIRKSRFN TNKEGKVVSR 120 LWLCSREGQR LPKYLDRIAE KSRAPKALTR VGCKAQFRIR YDVDAGKGGQ YVVTHFVADH 180 NHELAEQHCV MYLKSHRSLN NADKAQAMAI CNVGVMTSQI MDYMVNQSGS YENIGFIRTD 240 LHNHIQAERR AEVDDGDAQD SKSRADYAKF GDVLIFYSTY KTNAYKKPFV MLAGVTTHFK 300 TTIFACVLLA NETIETYTWV LETFMEAMNN KAPVSVLTDG DKAMREAIRK VFPDTRHRLC 360 NWHLGKNAVS NVHISGFAHV FKQCMDMETD ETKFEHGWTT MVEKFGLQTN SWVLKTYEKR 420 HMWAEAHMRG HFFAGMKSTQ RSECMNAYFN PFLQHKLKLY EFVRNYDPAL VRIRWTRAAS 480 KDGQQ

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MAPAEVKREG DDYDIPNEAD DIRLMNESWP EPYHGCEAGL SNEEATNMNV EDGGADVKKE  60
MVDDAHRNDM VGDVERAILE QKFDSVEDGE AFYNAYAKAK GFSIRKSRFN TNKEGKVVSR  120
LWLCSREGQR LPKYLDRIAE KSRAPKALTR VGCKAQFRIR YDVDAGKGGQ YVVTHFVADH  180
NHELAEQHCV MYLKSHRSLN NADKAQAMAI CNVGVMTSQI MDYMVNQSGS YENIGFIRTD  240
LHNHIQAERR AEVDDGDAQD SKSRADYAKF GDVLIFYSTY KTNAYKKPFV MLAGVTTHFK  300
TTIFACVLLA NETIETYTWV LETFMEAMNN KAPVSVLTDG DKAMREAIRK VFPDTRHRLC  360
NWHLGKNAVS NVHISGFAHV FKQCMDMETD ETKFEHGWTT MVEKFGLQTN SWVLKTYEKR  420
HMWAEAHMRG HFFAGMKSTQ RSECMNAYFN PFLQHKLKLY EFVRNYDPAL VRIRWTRAAS  480
KDGQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-69	FAR1 family protein