PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028123310.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 470aa MW: 53870.4 Da PI: 6.3834

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028123310.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	60	7.6e-19	92	185	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 fYn+YAk+ Fs+rks+ +++ ++g++++r + Cs+eg+r + + ek+r +++ tr+gCka+++++ + gk++vt++ +HnH+la XP_028123310.1 92 FYNAYAKTKEFSIRKSRFNTN-KEGKVVSRLWLCSREGQRLPIYLDhvVEKSRAPKVLTRVGCKAQFRIRYDAdaskGGKYVVTHFIADHNHKLA 185 9**************9999.666699999*****99887777899999***********9987666689************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MARTEVQREG DDYDIPNEAD DIRLMNGSRV EPYHGCEAGP SNEEATNMNF EDGGADVKKE 60 MVDDAHGNDM VGDVERAILE QKFDSVEDGE AFYNAYAKTK EFSIRKSRFN TNKEGKVVSR 120 LWLCSREGQR LPIYLDHVVE KSRAPKVLTR VGCKAQFRIR YDADASKGGK YVVTHFIADH 180 NHKLAEQHCV MYLRSHRSLN SADKAQAIAM RNVGVKTSQI MDYMVNQSGS YENVGFVRTD 240 LHNHIQTERK AEVEDGDTQG ALVYLCAKLD VDAPNETIET YTWVLETFME AMGNKAPMSE 300 LTDGDKAMRE AIRRVFPDAR HRLCNWHLGK NAVSNVHISG FAHAFKQCMD METDETKFEH 360 GWTTMVEKFG LQTNSWVLET YEKRHMWAEA YMRGHFFTGM KSTQRSECMN AYFNPFLQHK 420 LKLYEFVRHY DRALARIRYN EAGDDAETNN TFPMDKGCKQ GWPAMASTLN

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MARTEVQREG DDYDIPNEAD DIRLMNGSRV EPYHGCEAGP SNEEATNMNF EDGGADVKKE  60
MVDDAHGNDM VGDVERAILE QKFDSVEDGE AFYNAYAKTK EFSIRKSRFN TNKEGKVVSR  120
LWLCSREGQR LPIYLDHVVE KSRAPKVLTR VGCKAQFRIR YDADASKGGK YVVTHFIADH  180
NHKLAEQHCV MYLRSHRSLN SADKAQAIAM RNVGVKTSQI MDYMVNQSGS YENVGFVRTD  240
LHNHIQTERK AEVEDGDTQG ALVYLCAKLD VDAPNETIET YTWVLETFME AMGNKAPMSE  300
LTDGDKAMRE AIRRVFPDAR HRLCNWHLGK NAVSNVHISG FAHAFKQCMD METDETKFEH  360
GWTTMVEKFG LQTNSWVLET YEKRHMWAEA YMRGHFFTGM KSTQRSECMN AYFNPFLQHK  420
LKLYEFVRHY DRALARIRYN EAGDDAETNN TFPMDKGCKQ GWPAMASTLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	5e-32	FAR1 family protein