PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028123433.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 579aa MW: 63435.5 Da PI: 7.4778

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028123433.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	57.3	2.8e-18	276	325	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f+ Lrel+P++ ++K +Ka+ L +++eYI++Lq XP_028123433.1 276 RSKHSATEQRRRSKINDRFQMLRELIPHS----DQKRDKASFLLEVIEYIQYLQ 325 889***********************9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 579 aa Download sequence
MELPQPRPFG AEGRKSTHDF LSLYSPVQDP KPSQGGYLKT HDFLQPLERL GKNIAKEENT 60 VEITKLEKPL LPAPPPPSSG GEHLLPGGIG TYSISHISYF NQRFLKPEAP TILTVAEASS 120 TDRNNDENSN CSSYTGSGFT LWEESVAAAV TKKGKTGKEN ITGDRHVPRE TGVKMGGRQG 180 GQWTTSSERP SQSSSNNTTT TTNHRNPTTI FSSQPQKNQS FMDMLKSAKG AHDEDDDDDD 240 EFVLKKEPSP HLKNDLTVTV AAEGGKSTDH KPNTPRSKHS ATEQRRRSKI NDRFQMLREL 300 IPHSDQKRDK ASFLLEVIEY IQYLQEKVHK YEGSYQGWNQ EPPKLMPWQR NSHQPAEVFM 360 DQSQATNSGS CPALMFAAKF DEDNIIGSPT NPRNGQNAVE SDMSTVTTVK AIDHHSGLTN 420 KAVPLPVPVQ PNIFTPSGSG TAMAPIPARV KSDIENLTSQ PQSQFWQGRS CPTDCAVASN 480 KLKEQELTIE SGRISISSVY SQGLLNTLTQ ALQSCGVDLS QASISVQIDL GKRATSRLPA 540 STSTVKDNDI HSSNPAMARS RGATSGEESD QALKRLKKS

Sequence ? help Back to Top

Protein Sequence Length: 579 aa Download sequence

MELPQPRPFG AEGRKSTHDF LSLYSPVQDP KPSQGGYLKT HDFLQPLERL GKNIAKEENT  60
VEITKLEKPL LPAPPPPSSG GEHLLPGGIG TYSISHISYF NQRFLKPEAP TILTVAEASS  120
TDRNNDENSN CSSYTGSGFT LWEESVAAAV TKKGKTGKEN ITGDRHVPRE TGVKMGGRQG  180
GQWTTSSERP SQSSSNNTTT TTNHRNPTTI FSSQPQKNQS FMDMLKSAKG AHDEDDDDDD  240
EFVLKKEPSP HLKNDLTVTV AAEGGKSTDH KPNTPRSKHS ATEQRRRSKI NDRFQMLREL  300
IPHSDQKRDK ASFLLEVIEY IQYLQEKVHK YEGSYQGWNQ EPPKLMPWQR NSHQPAEVFM  360
DQSQATNSGS CPALMFAAKF DEDNIIGSPT NPRNGQNAVE SDMSTVTTVK AIDHHSGLTN  420
KAVPLPVPVQ PNIFTPSGSG TAMAPIPARV KSDIENLTSQ PQSQFWQGRS CPTDCAVASN  480
KLKEQELTIE SGRISISSVY SQGLLNTLTQ ALQSCGVDLS QASISVQIDL GKRATSRLPA  540
STSTVKDNDI HSSNPAMARS RGATSGEESD QALKRLKKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	1e-104	bHLH family protein