PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028123515.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 331aa    MW: 37795.6 Da    PI: 8.5327
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028123515.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR162.11.7e-1937123291
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     fY +YAk+vGFs+  ++++   ++++ ++    Cs+ g+r++++k   +  +++ +t++gCka+++ +++kdg++++t+++leHnH+l p
  XP_028123515.1  37 FYGKYAKHVGFSIACRAQHFG-DDEQLKNFAIECSRAGERKKKSKV--NPLKPSLSTKIGCKARVQGSLQKDGRYMLTTVNLEHNHDLIP 123
                     9*************9998877.7888***************99877..9999***********************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MEVDSNGGNN PSVNEGEQVE EPKKGMYFSS KEEVYTFYGK YAKHVGFSIA CRAQHFGDDE  60
QLKNFAIECS RAGERKKKSK VNPLKPSLST KIGCKARVQG SLQKDGRYML TTVNLEHNHD  120
LIPTDSRHFA MNKKILTPMK RRLEINDEAG IGVSRNYHSM VVEAGGRGGY ESLTFDERDA  180
RNYIDRARRL RLGEGDAQSL QSYYMRMQPH SEKFFYVIDV DDECRIRNLF WANARSRATY  240
EAFGDVVSFD KTYLTNKYDM SCAPFVGVNH HGQSILLGCG LLSSEDTDTF VWLFKSWLSC  300
MSNRHSKAII TDQCRAMQNA IDIVFPQARH R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.13e-63FAR1 family protein