PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028123693.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 239aa    MW: 25657.3 Da    PI: 7.8923
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028123693.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.60.0002136158123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C++sF++   L  H r+H
  XP_028123693.1 136 HECSICHRSFPTGQALGGHKRRH 158
                     78*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MALEALNSPT TAFDDMDIHS LEPWMKRKRS KRPRTENPPT EEEYLALCLI MLARGGATTQ  60
THQSTDSSPS SSKPSYKCTV CDKAFHSYQA LGGHKASHRK LTGAAATTSD DQPSTSTTTT  120
TTASTTAPLN PSGRTHECSI CHRSFPTGQA LGGHKRRHYD GGNTKDNGGG SSGVISSGST  180
SQSHRDFDLN LPASPEFGMG LSVDCLRKSQ FFGDQEVESP LPMKKSRLSF PSDLGSSQD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12532MKRKRSKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.17e-42C2H2 family protein