PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028123834.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 377aa MW: 42873.9 Da PI: 8.7239

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028123834.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	49.9	1.1e-15	90	176	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +YAk++GF + ++++ + +g+++ C++ kr+++++ + +++ +++++Ckak++ +++ +g++++t+++leH H+l XP_028123834.1 90 EFYAKYAKNLGFAIAYRTQNV-RSDGKVKYFGIECTRAQKRTKRSEV--NPLKPSLSSKIDCKAKVRGTLQPNGRYKLTTVVLEHAHDLI 176 6***********9887665.48999**********999876..9999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MVFRCLKDFN VAMLAKQGWW LLKYPNNLLG LISSLLSSVD GARFAVLMVL TLSGGEEVEE 60 AENNPSLNES DEIEEPKKGM WFTSKQEVHE FYAKYAKNLG FAIAYRTQNV RSDGKVKYFG 120 IECTRAQKRT KRSEVNPLKP SLSSKIDCKA KVRGTLQPNG RYKLTTVVLE HAHDLIPSDS 180 RHFPMNKRIR TLVKRRLEIN NEAGIGVSRN FDSIVVEAGG YEALTFDERD ARNHIQNARR 240 LRLGVGDAES VAFYFHRMQQ ENSNFYSAID FDVDGPIRNL FWADARSRAA YKAFGDVVSF 300 DTTYLTNKYD MPFAPFVGVN HHGQSILFGC GLLSYENTDT FVWLFKEWLN CMSATPPKAI 360 ITDQCRAMQN AIQIVFP

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MVFRCLKDFN VAMLAKQGWW LLKYPNNLLG LISSLLSSVD GARFAVLMVL TLSGGEEVEE  60
AENNPSLNES DEIEEPKKGM WFTSKQEVHE FYAKYAKNLG FAIAYRTQNV RSDGKVKYFG  120
IECTRAQKRT KRSEVNPLKP SLSSKIDCKA KVRGTLQPNG RYKLTTVVLE HAHDLIPSDS  180
RHFPMNKRIR TLVKRRLEIN NEAGIGVSRN FDSIVVEAGG YEALTFDERD ARNHIQNARR  240
LRLGVGDAES VAFYFHRMQQ ENSNFYSAID FDVDGPIRNL FWADARSRAA YKAFGDVVSF  300
DTTYLTNKYD MPFAPFVGVN HHGQSILFGC GLLSYENTDT FVWLFKEWLN CMSATPPKAI  360
ITDQCRAMQN AIQIVFP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-61	FAR1 family protein