PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028123887.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 449aa MW: 50283 Da PI: 6.9374

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028123887.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	114.8	8.9e-36	46	188	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee.vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........ 79 lp+G++F+Ptd+el+ e+L++kv++k+ ++++ +ik +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ XP_028123887.1 46 LPAGVKFDPTDQELI-EHLEAKVDAKDskshplIDEFIpTIKGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlqgg 138 799**********.99**9996665543333334776646******.555666799**************73334555544 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_028123887.1 139 ETRWHKTGKTRPVMA-NGRQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 188 778********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MNTSQLGSIS SSDLIDAKLE EHQLCGSKQC PGCGHKLEGK PDWVGLPAGV KFDPTDQELI 60 EHLEAKVDAK DSKSHPLIDE FIPTIKGEDG ICYTHPEKLP GVTRDGLSRH FFHRPSKAYT 120 TGTRKRRKIQ TECDLQGGET RWHKTGKTRP VMANGRQKGC KKILVLYTNF GKNRKPEKTN 180 WVMHQYHLGQ HEEEKEGELV VSKIFYQTQP RQCNWSDRSG AAAAGEGNST EPNSRRGESG 240 SCSLKELEVI TQRDELSAVG VGVGAAMSSY SAIDIQQLKA DHFSYAPFRK SFDEARVGEA 300 STTREASASG TCEEHNLHEL QRPRHAIHEQ QQQQHQHHQI ASTAFHISRP SLPISTIISP 360 PPLHHTSIIL DEDSFHVSRI MLQNENFQQQ QQQHHKLGGR SASGLEELIM GCTSNAADMK 420 QESSMTNPQE AEWLKYSFWP DPDNPDHHG

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MNTSQLGSIS SSDLIDAKLE EHQLCGSKQC PGCGHKLEGK PDWVGLPAGV KFDPTDQELI  60
EHLEAKVDAK DSKSHPLIDE FIPTIKGEDG ICYTHPEKLP GVTRDGLSRH FFHRPSKAYT  120
TGTRKRRKIQ TECDLQGGET RWHKTGKTRP VMANGRQKGC KKILVLYTNF GKNRKPEKTN  180
WVMHQYHLGQ HEEEKEGELV VSKIFYQTQP RQCNWSDRSG AAAAGEGNST EPNSRRGESG  240
SCSLKELEVI TQRDELSAVG VGVGAAMSSY SAIDIQQLKA DHFSYAPFRK SFDEARVGEA  300
STTREASASG TCEEHNLHEL QRPRHAIHEQ QQQQHQHHQI ASTAFHISRP SLPISTIISP  360
PPLHHTSIIL DEDSFHVSRI MLQNENFQQQ QQQHHKLGGR SASGLEELIM GCTSNAADMK  420
QESSMTNPQE AEWLKYSFWP DPDNPDHHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-173	NAC family protein