PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028123959.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 309aa    MW: 35198.2 Da    PI: 9.5661
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028123959.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR142.12.8e-1322108190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     +fY +YAk++GF +  ++++    +g+++     C++  kr+++ +   +  +++ + +++Ckak++ +++ dg+ ++++++leH+H+l 
  XP_028123959.1  22 EFYAKYAKNLGFAIAYRTQNVG-ADGKVKYFGIECTRVQKRTKRLEV--NPLKPSLSPKIDCKAKVRATLQPDGRSKLITVVLEHTHDLI 108
                     6*************99987776.8999************99999876..9999***********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MSGEIEEPKK GMFFTSKQEV HEFYAKYAKN LGFAIAYRTQ NVGADGKVKY FGIECTRVQK  60
RTKRLEVNPL KPSLSPKIDC KAKVRATLQP DGRSKLITVV LEHTHDLIPS NSRHFPMNKR  120
IRTPVKRKLE INDEAGIGVS RNFHSIVVEA GGYEALTFDE RDARNHIENV RRLRLGIGDA  180
ESVAFYFHRI QQENSNLYSA IDFDVDGRIQ NLFWADARSR AAYKAFGDVI SFDTTYLTNK  240
YDMSFALFVG VNHHGQSILF GCGLLSNENT KTFVWLFKDW LNCISVTLSK AIITDQCRAM  300
QNAIQIVFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.15e-57FAR1 family protein