PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028124057.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 383aa MW: 42375.9 Da PI: 8.3597

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028124057.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.7	1.2e-33	32	86	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl XP_028124057.1 32 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 86 79****************************************************8 PP
2	Myb_DNA-binding	72.4	6.9e-23	34	85	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ XP_028124057.1 34 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 85 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MFHSKKPATM NSHDRPMCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP 60 KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHSIK DAVQLSVVAS ALDLQRNTAS 120 SSGIMARSMN DSNFHFTDAI RMQMEVQRRL HEQLEVQRHL QLRIEAQGKY MQTILEKACQ 180 TLAGENMAAS GSYKGGGNQG VSDNIGAMKD FGSPLLNFPS LQDLNIYGGD QLDLQVQHNM 240 DRSSPVLHDG FMPSNNDHNM CGGLGKKRPI NPYGSGKSPL MWSDDHLHLQ ELGTTTTTTT 300 SSCLGSQQDD QIHIDRGTDM ESMSEMYETK PILSGNAMGE KKFDASAKLE RPSPRRAPVS 360 ADHRINNPAA ANTMPQGRNS PFG

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MFHSKKPATM NSHDRPMCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP  60
KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHSIK DAVQLSVVAS ALDLQRNTAS  120
SSGIMARSMN DSNFHFTDAI RMQMEVQRRL HEQLEVQRHL QLRIEAQGKY MQTILEKACQ  180
TLAGENMAAS GSYKGGGNQG VSDNIGAMKD FGSPLLNFPS LQDLNIYGGD QLDLQVQHNM  240
DRSSPVLHDG FMPSNNDHNM CGGLGKKRPI NPYGSGKSPL MWSDDHLHLQ ELGTTTTTTT  300
SSCLGSQQDD QIHIDRGTDM ESMSEMYETK PILSGNAMGE KKFDASAKLE RPSPRRAPVS  360
ADHRINNPAA ANTMPQGRNS PFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-124	G2-like family protein