PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028124063.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 382aa MW: 42288.8 Da PI: 8.3597

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028124063.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.8	1.2e-33	32	86	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl XP_028124063.1 32 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 86 79****************************************************8 PP
2	Myb_DNA-binding	72.4	6.8e-23	34	85	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ XP_028124063.1 34 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 85 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MFHSKKPATM NSHDRPMCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP 60 KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHSIK DAVQLSVVAS ALDLQRNTAS 120 SSGIMARSMN DNFHFTDAIR MQMEVQRRLH EQLEVQRHLQ LRIEAQGKYM QTILEKACQT 180 LAGENMAASG SYKGGGNQGV SDNIGAMKDF GSPLLNFPSL QDLNIYGGDQ LDLQVQHNMD 240 RSSPVLHDGF MPSNNDHNMC GGLGKKRPIN PYGSGKSPLM WSDDHLHLQE LGTTTTTTTS 300 SCLGSQQDDQ IHIDRGTDME SMSEMYETKP ILSGNAMGEK KFDASAKLER PSPRRAPVSA 360 DHRINNPAAA NTMPQGRNSP FG

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MFHSKKPATM NSHDRPMCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP  60
KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHSIK DAVQLSVVAS ALDLQRNTAS  120
SSGIMARSMN DNFHFTDAIR MQMEVQRRLH EQLEVQRHLQ LRIEAQGKYM QTILEKACQT  180
LAGENMAASG SYKGGGNQGV SDNIGAMKDF GSPLLNFPSL QDLNIYGGDQ LDLQVQHNMD  240
RSSPVLHDGF MPSNNDHNMC GGLGKKRPIN PYGSGKSPLM WSDDHLHLQE LGTTTTTTTS  300
SCLGSQQDDQ IHIDRGTDME SMSEMYETKP ILSGNAMGEK KFDASAKLER PSPRRAPVSA  360
DHRINNPAAA NTMPQGRNSP FG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-124	G2-like family protein