PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028124076.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 375aa MW: 41592 Da PI: 8.3597

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028124076.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.8	1.2e-33	32	86	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl XP_028124076.1 32 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 86 79****************************************************8 PP
2	Myb_DNA-binding	72.4	6.7e-23	34	85	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ XP_028124076.1 34 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 85 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MFHSKKPATM NSHDRPMCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP 60 KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHSIK DASALDLQRN TASSSGIMAR 120 SMNDNFHFTD AIRMQMEVQR RLHEQLEVQR HLQLRIEAQG KYMQTILEKA CQTLAGENMA 180 ASGSYKGGGN QGVSDNIGAM KDFGSPLLNF PSLQDLNIYG GDQLDLQVQH NMDRSSPVLH 240 DGFMPSNNDH NMCGGLGKKR PINPYGSGKS PLMWSDDHLH LQELGTTTTT TTSSCLGSQQ 300 DDQIHIDRGT DMESMSEMYE TKPILSGNAM GEKKFDASAK LERPSPRRAP VSADHRINNP 360 AAANTMPQGR NSPFG

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MFHSKKPATM NSHDRPMCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP  60
KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHSIK DASALDLQRN TASSSGIMAR  120
SMNDNFHFTD AIRMQMEVQR RLHEQLEVQR HLQLRIEAQG KYMQTILEKA CQTLAGENMA  180
ASGSYKGGGN QGVSDNIGAM KDFGSPLLNF PSLQDLNIYG GDQLDLQVQH NMDRSSPVLH  240
DGFMPSNNDH NMCGGLGKKR PINPYGSGKS PLMWSDDHLH LQELGTTTTT TTSSCLGSQQ  300
DDQIHIDRGT DMESMSEMYE TKPILSGNAM GEKKFDASAK LERPSPRRAP VSADHRINNP  360
AAANTMPQGR NSPFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-124	G2-like family protein