PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028124089.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 373aa MW: 41200.6 Da PI: 8.356

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028124089.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.8	1.2e-33	32	86	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl XP_028124089.1 32 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 86 79****************************************************8 PP
2	Myb_DNA-binding	72.5	6.6e-23	34	85	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ XP_028124089.1 34 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 85 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MFHSKKPATM NSHDRPMCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP 60 KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHSIK DAVQLSVVAS ALDLQRNTAS 120 SSGIMARSMN EMQMEVQRRL HEQLEVQRHL QLRIEAQGKY MQTILEKACQ TLAGENMAAS 180 GSYKGGGNQG VSDNIGAMKD FGSPLLNFPS LQDLNIYGGD QLDLQVQHNM DRSSPVLHDG 240 FMPSNNDHNM CGGLGKKRPI NPYGSGKSPL MWSDDHLHLQ ELGTTTTTTT SSCLGSQQDD 300 QIHIDRGTDM ESMSEMYETK PILSGNAMGE KKFDASAKLE RPSPRRAPVS ADHRINNPAA 360 ANTMPQGRNS PFG

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MFHSKKPATM NSHDRPMCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP  60
KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHSIK DAVQLSVVAS ALDLQRNTAS  120
SSGIMARSMN EMQMEVQRRL HEQLEVQRHL QLRIEAQGKY MQTILEKACQ TLAGENMAAS  180
GSYKGGGNQG VSDNIGAMKD FGSPLLNFPS LQDLNIYGGD QLDLQVQHNM DRSSPVLHDG  240
FMPSNNDHNM CGGLGKKRPI NPYGSGKSPL MWSDDHLHLQ ELGTTTTTTT SSCLGSQQDD  300
QIHIDRGTDM ESMSEMYETK PILSGNAMGE KKFDASAKLE RPSPRRAPVS ADHRINNPAA  360
ANTMPQGRNS PFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-128	G2-like family protein