PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028124093.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 830aa MW: 96736.6 Da PI: 8.6492

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028124093.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	84.2	2.1e-26	41	129	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYneY++ vGFs+r+++ +ks+++g +t+r+fvC keg+re++k+ + +++r+etrt+Cka ++++ ++ +kw v+k++ +HnH+l XP_028124093.1 41 EFYNEYGRIVGFSIRRDYCNKSQKDGDMTSRKFVCCKEGEREKDKRY-TMIKNPRSETRTNCKAFMRISFKRdLSKWIVSKFDCNHNHPL 129 6*****************************************999.99***************999799***********99 PP

Sequence ? help Back to Top
Protein Sequence Length: 830 aa Download sequence
MEDSIMDDGG LKGCIEEMGE LAKDKSPYLG MEFSSEEAAY EFYNEYGRIV GFSIRRDYCN 60 KSQKDGDMTS RKFVCCKEGE REKDKRYTMI KNPRSETRTN CKAFMRISFK RDLSKWIVSK 120 FDCNHNHPLH LPQCTHLMPS QRKVCDAQGI NIDIADESGI SLKASHDLIS AIAGGKEFVG 180 FTREDQKAYL RAKRQRNLQY GEAGSLLRYF QQQVAENPYF YYAIQLDVDE MITNIFWADH 240 QMITDYGLFG DAVSFDTTFR TNKEYRPLAL FCGFNHFRMT VIFGAALLYD ETAESFEWLF 300 ETFLDAMSGK KPVSFFTDQD QAMAKAISQI MPEVFHGLCT FHLMQNALKH LGYLFKSGSK 360 FSSDLKACIY DYENEHELIE TWNSLIDKYN LQENEWMKRT WRKREQWAHV YMKWVFTGGM 420 RSTQLSESLN GTLRGYLKGD HNIVQFFTHF NRIVVDKRYE EISAIYDSRQ KLPRMKLKKS 480 PILIQVTSLY TPPIFDLFHC ELDTSLCCQV KQFHELEGEV KCVIGLYGNG KEYIVEGRVE 540 VIGLRGEKSC REIHCTCKKF ENFGILCSHA IKALDRMNVM EIPERYILGR WRLDAKDCEI 600 EEKNVVMDED DPKLLILARY RDLCPRMVKL ATQASMHKPA YQLVSLDVDD PNFAQVKGIK 660 KKDVGHKGRG RLKPWHEMMN KKTKVISQPT RLSKNWSIKQ HYKCSKFILK PTTDYWSIKQ 720 YHKYSKFNFK STTGWWESLL ATIDNLWVLH ILLKLLYPIQ TLKWDLSDTK LGKNKLATVI 780 RGSMTVLHIL LKLLYPIQTL KWDLSDTKLG KNKLATVIRG SMTVSQYELE

Sequence ? help Back to Top

Protein Sequence Length: 830 aa Download sequence

MEDSIMDDGG LKGCIEEMGE LAKDKSPYLG MEFSSEEAAY EFYNEYGRIV GFSIRRDYCN  60
KSQKDGDMTS RKFVCCKEGE REKDKRYTMI KNPRSETRTN CKAFMRISFK RDLSKWIVSK  120
FDCNHNHPLH LPQCTHLMPS QRKVCDAQGI NIDIADESGI SLKASHDLIS AIAGGKEFVG  180
FTREDQKAYL RAKRQRNLQY GEAGSLLRYF QQQVAENPYF YYAIQLDVDE MITNIFWADH  240
QMITDYGLFG DAVSFDTTFR TNKEYRPLAL FCGFNHFRMT VIFGAALLYD ETAESFEWLF  300
ETFLDAMSGK KPVSFFTDQD QAMAKAISQI MPEVFHGLCT FHLMQNALKH LGYLFKSGSK  360
FSSDLKACIY DYENEHELIE TWNSLIDKYN LQENEWMKRT WRKREQWAHV YMKWVFTGGM  420
RSTQLSESLN GTLRGYLKGD HNIVQFFTHF NRIVVDKRYE EISAIYDSRQ KLPRMKLKKS  480
PILIQVTSLY TPPIFDLFHC ELDTSLCCQV KQFHELEGEV KCVIGLYGNG KEYIVEGRVE  540
VIGLRGEKSC REIHCTCKKF ENFGILCSHA IKALDRMNVM EIPERYILGR WRLDAKDCEI  600
EEKNVVMDED DPKLLILARY RDLCPRMVKL ATQASMHKPA YQLVSLDVDD PNFAQVKGIK  660
KKDVGHKGRG RLKPWHEMMN KKTKVISQPT RLSKNWSIKQ HYKCSKFILK PTTDYWSIKQ  720
YHKYSKFNFK STTGWWESLL ATIDNLWVLH ILLKLLYPIQ TLKWDLSDTK LGKNKLATVI  780
RGSMTVLHIL LKLLYPIQTL KWDLSDTKLG KNKLATVIRG SMTVSQYELE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-115	FAR1 family protein