PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028124099.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 366aa MW: 40503.8 Da PI: 8.356

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028124099.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.8	1.2e-33	32	86	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl XP_028124099.1 32 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 86 79****************************************************8 PP
2	Myb_DNA-binding	72.5	6.4e-23	34	85	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ XP_028124099.1 34 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 85 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MFHSKKPATM NSHDRPMCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP 60 KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHSIK DASALDLQRN TASSSGIMAR 120 SMNEMQMEVQ RRLHEQLEVQ RHLQLRIEAQ GKYMQTILEK ACQTLAGENM AASGSYKGGG 180 NQGVSDNIGA MKDFGSPLLN FPSLQDLNIY GGDQLDLQVQ HNMDRSSPVL HDGFMPSNND 240 HNMCGGLGKK RPINPYGSGK SPLMWSDDHL HLQELGTTTT TTTSSCLGSQ QDDQIHIDRG 300 TDMESMSEMY ETKPILSGNA MGEKKFDASA KLERPSPRRA PVSADHRINN PAAANTMPQG 360 RNSPFG

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MFHSKKPATM NSHDRPMCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP  60
KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHSIK DASALDLQRN TASSSGIMAR  120
SMNEMQMEVQ RRLHEQLEVQ RHLQLRIEAQ GKYMQTILEK ACQTLAGENM AASGSYKGGG  180
NQGVSDNIGA MKDFGSPLLN FPSLQDLNIY GGDQLDLQVQ HNMDRSSPVL HDGFMPSNND  240
HNMCGGLGKK RPINPYGSGK SPLMWSDDHL HLQELGTTTT TTTSSCLGSQ QDDQIHIDRG  300
TDMESMSEMY ETKPILSGNA MGEKKFDASA KLERPSPRRA PVSADHRINN PAAANTMPQG  360
RNSPFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-128	G2-like family protein