PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028124102.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 364aa MW: 40345.6 Da PI: 8.356

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028124102.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.9	1.2e-33	32	86	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl XP_028124102.1 32 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 86 79****************************************************8 PP
2	Myb_DNA-binding	72.5	6.4e-23	34	85	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ XP_028124102.1 34 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 85 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MFHSKKPATM NSHDRPMCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP 60 KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHSIK DALDLQRNTA SSSGIMARSM 120 NEMQMEVQRR LHEQLEVQRH LQLRIEAQGK YMQTILEKAC QTLAGENMAA SGSYKGGGNQ 180 GVSDNIGAMK DFGSPLLNFP SLQDLNIYGG DQLDLQVQHN MDRSSPVLHD GFMPSNNDHN 240 MCGGLGKKRP INPYGSGKSP LMWSDDHLHL QELGTTTTTT TSSCLGSQQD DQIHIDRGTD 300 MESMSEMYET KPILSGNAMG EKKFDASAKL ERPSPRRAPV SADHRINNPA AANTMPQGRN 360 SPFG

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MFHSKKPATM NSHDRPMCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP  60
KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHSIK DALDLQRNTA SSSGIMARSM  120
NEMQMEVQRR LHEQLEVQRH LQLRIEAQGK YMQTILEKAC QTLAGENMAA SGSYKGGGNQ  180
GVSDNIGAMK DFGSPLLNFP SLQDLNIYGG DQLDLQVQHN MDRSSPVLHD GFMPSNNDHN  240
MCGGLGKKRP INPYGSGKSP LMWSDDHLHL QELGTTTTTT TSSCLGSQQD DQIHIDRGTD  300
MESMSEMYET KPILSGNAMG EKKFDASAKL ERPSPRRAPV SADHRINNPA AANTMPQGRN  360
SPFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-126	G2-like family protein