PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028124104.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 371aa    MW: 42283.5 Da    PI: 6.1607
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028124104.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR123.12.4e-0792129240
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegk 40 
                     fYn YAk  GFs+rks+ +++k+ + + +r + Cs+e  
  XP_028124104.1  92 FYNMYAKAKGFSIRKSRFNTNKERK-VFSRLWLCSREDA 129
                     9****************99996665.9999999**9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
MAPAEVKREG DDYGIPNEAD DIRLMNESWA EPYHGCEAGP SNEEATNMNV EDGGADVKKE  60
MVDDSPRKDM VGDVERAILE HKFDSVEDGE AFYNMYAKAK GFSIRKSRFN TNKERKVFSR  120
LWLCSREDAG EGEKYVVTYF VAGHNHELAE QHCVMYLRSH RSLNSADKAQ AMAMRNIGVK  180
TSQIMDYMVN QSGSYENVGF IRTDLHNHIQ AERSAKVEDG DAQDSKSRGD YAKFGDVLIF  240
DSTYRTNAYK KPFVMLAEAM GNKALVSVLT DGDKAMREAI RKVFLDARLR LCNWHLGKNV  300
VSNVHISGFA HAFKQCMDTE TDETKFEHGW TTMVEKFGLQ TNSWVLETYE KRHMWVEAYM  360
RGHFFAGMKS T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-35FAR1 family protein