PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028124169.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 408aa MW: 45926.7 Da PI: 5.6814

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028124169.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.9	4e-53	23	150	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdeelv++yLk+k++gk++++ ++++e+d+yk+ePw+L +++k+++ ewyfFs+ d+ky +g+r nrat +gyWkatgkd++v XP_028124169.1 23 LAPGFRFHPTDEELVQYYLKRKASGKPFRF-DAVSEIDVYKSEPWELSghSRLKSRDLEWYFFSPVDRKYGNGSRLNRATGKGYWKATGKDRPVR 116 579************************9.99**********85348888888*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + kg+++g+kktLvf++grap+g++t+Wvmheyrl XP_028124169.1 117 H-KGQTIGMKKTLVFHSGRAPDGKRTNWVMHEYRL 150 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MGHDLLAITP APPPPPPPPP TSLAPGFRFH PTDEELVQYY LKRKASGKPF RFDAVSEIDV 60 YKSEPWELSG HSRLKSRDLE WYFFSPVDRK YGNGSRLNRA TGKGYWKATG KDRPVRHKGQ 120 TIGMKKTLVF HSGRAPDGKR TNWVMHEYRL AEEDLERARV AQDAFVLCRI FQKSGLGPPN 180 GDRYAPFIEE EWNDDALLVI PGEEAGDEMV NGDDAQMEGS ELEQDAHTHS IKAPLCRTEL 240 PNGSQNVSFV CKRERSDDCP LPCTADAEPL CLAQNKRSRP DDPNSTCANG SEDSITTTHD 300 LCISTTVATT TKFPSALLEF PLLESLEPKQ NHPNNPPTFD AANLEKSVPP GYLKFISNLE 360 NEILNVSMER ETMKLEVMRA QAMINILQSR IDLLNKENED LRRVVRDR

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MGHDLLAITP APPPPPPPPP TSLAPGFRFH PTDEELVQYY LKRKASGKPF RFDAVSEIDV  60
YKSEPWELSG HSRLKSRDLE WYFFSPVDRK YGNGSRLNRA TGKGYWKATG KDRPVRHKGQ  120
TIGMKKTLVF HSGRAPDGKR TNWVMHEYRL AEEDLERARV AQDAFVLCRI FQKSGLGPPN  180
GDRYAPFIEE EWNDDALLVI PGEEAGDEMV NGDDAQMEGS ELEQDAHTHS IKAPLCRTEL  240
PNGSQNVSFV CKRERSDDCP LPCTADAEPL CLAQNKRSRP DDPNSTCANG SEDSITTTHD  300
LCISTTVATT TKFPSALLEF PLLESLEPKQ NHPNNPPTFD AANLEKSVPP GYLKFISNLE  360
NEILNVSMER ETMKLEVMRA QAMINILQSR IDLLNKENED LRRVVRDR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10490.2	1e-109	NAC family protein