PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028124170.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 550aa MW: 61282.2 Da PI: 4.4246

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028124170.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.8	1.1e-53	10	137	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdeelv +yL++kv gk++++ ++i+e+diyk+ePwdLp k ++k+++ ewyfFs dkky +g+r+nrat++gyWk+tgkd++vl XP_028124170.1 10 LAPGFRFHPTDEELVRYYLRRKVCGKPFRF-DAISEIDIYKSEPWDLPgKsRLKSRDLEWYFFSMLDKKYGNGSRTNRATERGYWKTTGKDRPVL 103 579************************9.99***********6347777888*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++++vg+kktLv+++grap+ge+++Wvmheyrl XP_028124170.1 104 H-NSRTVGMKKTLVYHSGRAPRGERSNWVMHEYRL 137 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
MGPDPASASL APGFRFHPTD EELVRYYLRR KVCGKPFRFD AISEIDIYKS EPWDLPGKSR 60 LKSRDLEWYF FSMLDKKYGN GSRTNRATER GYWKTTGKDR PVLHNSRTVG MKKTLVYHSG 120 RAPRGERSNW VMHEYRLVDE QLENSGIFQD AFVLCRIFQK SGTGPKNGEQ YGAPFVEEEW 180 EDDELVTVPS EQAAEEVAVS DDAYLDGIDL EQILDAEIPA EDVPLPLSFY YGDDGNQVQE 240 PVDFVDDAQK LLVATDESYC VSGQPDDQML FDLPAQTNMD TKPVRHEYIG EPSNAVNSVD 300 VDYLLDEPFM DAISNTPFDE GLFLETNDLS NPIEADPSSF GMLEDYRTYF DADGGNSQFM 360 AFDSSKMTGS VDLVSGHASL AQKHEGSQQL LKGHDDDVVS TSKQEPGKFG SDTQYPFVKH 420 ASRMLGNIPA PPAFASEFPS KDAVVRLNST SHSSSSVHFT TGMIQIRNMT LNGNGTYPLL 480 GKHTDVNIIL SFGISYNDST SASLDPMSGM LLGKAGSSMT RGWFYLIFFW VLLLSMSYKI 540 GTCLYTGNAS

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

MGPDPASASL APGFRFHPTD EELVRYYLRR KVCGKPFRFD AISEIDIYKS EPWDLPGKSR  60
LKSRDLEWYF FSMLDKKYGN GSRTNRATER GYWKTTGKDR PVLHNSRTVG MKKTLVYHSG  120
RAPRGERSNW VMHEYRLVDE QLENSGIFQD AFVLCRIFQK SGTGPKNGEQ YGAPFVEEEW  180
EDDELVTVPS EQAAEEVAVS DDAYLDGIDL EQILDAEIPA EDVPLPLSFY YGDDGNQVQE  240
PVDFVDDAQK LLVATDESYC VSGQPDDQML FDLPAQTNMD TKPVRHEYIG EPSNAVNSVD  300
VDYLLDEPFM DAISNTPFDE GLFLETNDLS NPIEADPSSF GMLEDYRTYF DADGGNSQFM  360
AFDSSKMTGS VDLVSGHASL AQKHEGSQQL LKGHDDDVVS TSKQEPGKFG SDTQYPFVKH  420
ASRMLGNIPA PPAFASEFPS KDAVVRLNST SHSSSSVHFT TGMIQIRNMT LNGNGTYPLL  480
GKHTDVNIIL SFGISYNDST SASLDPMSGM LLGKAGSSMT RGWFYLIFFW VLLLSMSYKI  540
GTCLYTGNAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-148	NAC family protein