PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028124367.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 391aa MW: 45454.6 Da PI: 5.9509

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028124367.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	86.5	4.1e-27	41	129	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYneY++ vGFs+r+++ +ksk++g +t+r+fvC keg+re++k+ + +++r+et+t+Cka ++++ ++ +kw v+k++++HnH+l XP_028124367.1 41 EFYNEYGRIVGFSIRRDYCNKSKKDGVMTSRKFVCCKEGEREKDKRY-TMIKNPRSETKTNCKAFMHISFKReLSKWIVSKFDSNHNHPL 129 6*****************************************999.99***************99889************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MEDSIIDDGG LEGCIEEMGE LAKDKSPYLG MEFPSEEAAY EFYNEYGRIV GFSIRRDYCN 60 KSKKDGVMTS RKFVCCKEGE REKDKRYTMI KNPRSETKTN CKAFMHISFK RELSKWIVSK 120 FDSNHNHPLH LPQCTHLMPS QRKVCNAQGI NIDIADETGI SLKASHDLIS VIAGGKEFVG 180 FTREDQKTYL RAKRQRNLQY GEAESLLRYF EQQVAENPYF YYAIQLDVDE MITNIFWADH 240 QMITDYGLFG DAVSFDTTFR TNKEYRPLAL FSSFNHFRMT VIFCAALLYN ETAESFEWLS 300 ETFLNAMSRK KPVSFFIDQD QAMAKAISQI MLEVFHGLCT FHLMQNDLKH LGYLFKSGSK 360 FSSDLKACIY DYENEHELIE AWNSLIDKYN L

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MEDSIIDDGG LEGCIEEMGE LAKDKSPYLG MEFPSEEAAY EFYNEYGRIV GFSIRRDYCN  60
KSKKDGVMTS RKFVCCKEGE REKDKRYTMI KNPRSETKTN CKAFMHISFK RELSKWIVSK  120
FDSNHNHPLH LPQCTHLMPS QRKVCNAQGI NIDIADETGI SLKASHDLIS VIAGGKEFVG  180
FTREDQKTYL RAKRQRNLQY GEAESLLRYF EQQVAENPYF YYAIQLDVDE MITNIFWADH  240
QMITDYGLFG DAVSFDTTFR TNKEYRPLAL FSSFNHFRMT VIFCAALLYN ETAESFEWLS  300
ETFLNAMSRK KPVSFFIDQD QAMAKAISQI MLEVFHGLCT FHLMQNDLKH LGYLFKSGSK  360
FSSDLKACIY DYENEHELIE AWNSLIDKYN L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-79	FAR1 family protein