PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028124569.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GeBP
Protein Properties Length: 277aa    MW: 32373.7 Da    PI: 4.4156
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028124569.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573415.1e-13121193984
          DUF573   9 eeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk...aksgkepsfskeh 84 
                     ++Dei++L+ ++d+ +k+g+ p ++ +a+ +f+k+s++++v   +l + i  L++K+ + ++k   +      + + +h
  XP_028124569.1 121 NNDEITILKSILDYYSKNGAYPLHNSHALQDFLKNSLQIDVRPWDLNDEISILREKYINIQEKesdM------NADDDH 193
                     58**********************************************************9994432......333333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MSQDSPRCPF EVPHEEEDES EELDTDTDNQ QQFEEEEADG SESDSENCSI HTSSPHPDIH  60
QETRTHNVFV FKPRCLKMKD INPPPDLSAK IPFKNSVEED NSQSRAQNGD HDEEKPRNDL  120
NNDEITILKS ILDYYSKNGA YPLHNSHALQ DFLKNSLQID VRPWDLNDEI SILREKYINI  180
QEKESDMNAD DDHLNKFNED EKKKGLRVEE EPDLSEFPFL KESLHFGKNL TALRLVGNSK  240
LKELNEKWRK LQVQELEFFL KRLDLIREQT KLILDAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.19e-07GeBP family protein