PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028124609.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 237aa    MW: 25910.5 Da    PI: 8.228
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028124609.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.12.4e-1179126454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++  rE+ RRd++N++f eL ++l +    + +K +Ka+iL  Av+ + +L
  XP_028124609.1  79 SKACREKLRRDKLNDKFMELGSILEPG---RPPKTDKAAILVDAVRMVTQL 126
                     6789**********************8...89**************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MVSPENTNWL FDYGLIEDIA VPDANFSAPA SGFGWPMQPL NASSNVGVEL DGSLGDSDSH  60
KETGSKKRAR PESCGASSSK ACREKLRRDK LNDKFMELGS ILEPGRPPKT DKAAILVDAV  120
RMVTQLRSEA QKLKDSNSSL HDKIKELKAE KNELRDEKQR LKVEKERLEQ QLKTVNVQPG  180
FMPPHPAIPA AAFAAQGQAG GNKLVPIISY PGVAMWQFMP PASVDTSQDH VLRPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-109bHLH family protein