PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028124821.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

CPP

Protein Properties

Length: 542aa MW: 58790.4 Da PI: 7.9025

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028124821.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	45.8	1.2e-14	97	136	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+C+C++s+Clk+YCeCfaag +C+ C+C++C+N+ e+ XP_028124821.1 97 KQKQCHCRNSRCLKLYCECFAAGIYCDA-CNCTNCHNNVEH 136 89***********************9.******9876 PP
2	TCR	52.9	7.2e-17	182	221	2	41
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 ++kgCnCkks ClkkYCeCf+a++ Cse+CkC dCkN ee XP_028124821.1 182 HNKGCNCKKSGCLKKYCECFQANVLCSENCKCMDCKNFEE 221 789**********************************887 PP

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence
MEQSATVSDF PQRKLAKQLE STAMCRASAN AILPAHPQAQ LQAKLLALAK PQSPPPPPQS 60 KRQRRLRAAH PLPVATMESP KSQQQNNIEV KDGTPKKQKQ CHCRNSRCLK LYCECFAAGI 120 YCDACNCTNC HNNVEHDAAR QEAVGATLER NPNAFQPKIA NSPHKSQDGR EEAREVTAMA 180 IHNKGCNCKK SGCLKKYCEC FQANVLCSEN CKCMDCKNFE ENEERKALFH GDHANFMSYI 240 QQAANAAING AIGTSHLGTL PALKKRKNQK LFFGGTASDQ SIHRITQFQQ ENRLRAPATS 300 SSLLSAPGSC TISASSMGSS KLIYRSPLAD VLQSQDVKEL CSLLVIVSAE ATKALAEKNG 360 KMDKKGDQLE SSLVSSDQEK HSKVEDNVQT SIPDDCLSGD QVDTAGNSGS DGSDAQTGRP 420 PSPSTLALMC DEQDTMVMAT GSPDAAASNG SLTNQSSQGQ IFTELYAEQE RIVLTKFWNF 480 LNRLISCGSI KEAMCSPSPK IKLGIQQEPE NCVTTTKTET SHKELDGTSI VKSVDQVVAK 540 MS

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence

MEQSATVSDF PQRKLAKQLE STAMCRASAN AILPAHPQAQ LQAKLLALAK PQSPPPPPQS  60
KRQRRLRAAH PLPVATMESP KSQQQNNIEV KDGTPKKQKQ CHCRNSRCLK LYCECFAAGI  120
YCDACNCTNC HNNVEHDAAR QEAVGATLER NPNAFQPKIA NSPHKSQDGR EEAREVTAMA  180
IHNKGCNCKK SGCLKKYCEC FQANVLCSEN CKCMDCKNFE ENEERKALFH GDHANFMSYI  240
QQAANAAING AIGTSHLGTL PALKKRKNQK LFFGGTASDQ SIHRITQFQQ ENRLRAPATS  300
SSLLSAPGSC TISASSMGSS KLIYRSPLAD VLQSQDVKEL CSLLVIVSAE ATKALAEKNG  360
KMDKKGDQLE SSLVSSDQEK HSKVEDNVQT SIPDDCLSGD QVDTAGNSGS DGSDAQTGRP  420
PSPSTLALMC DEQDTMVMAT GSPDAAASNG SLTNQSSQGQ IFTELYAEQE RIVLTKFWNF  480
LNRLISCGSI KEAMCSPSPK IKLGIQQEPE NCVTTTKTET SHKELDGTSI VKSVDQVVAK  540
MS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	61	99	KRQRRLRAAHPLPVATMESPKSQQQNNIEVKDGTPKKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-135	CPP family protein