PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028125116.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 307aa MW: 34360.2 Da PI: 8.7959

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028125116.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	47.9	2.4e-15	100	151	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i+ A+eY+k+L+ XP_028125116.1 100 QRMTHIAVERNRRKQMNEHLAVLRSLMPES---YVQRGDQASIVGGAIEYVKELE 151 79**************************...9****************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MGLEALSTNE PFNFVIYDTI FANPHDSSET SFLPETGLKP PEFGGGSDSS CSVKQRRRRR 60 LEGPEAGVME RRGNSGGVQG RKKRRRRAKV CKNKEEVETQ RMTHIAVERN RRKQMNEHLA 120 VLRSLMPESY VQRGDQASIV GGAIEYVKEL ERLLQSLEAQ KFLSLQGGER PPPPTTTTAT 180 TITATEFSST PFAQFFAHPQ YTWSQIPSKY TSKNKASVAD IEVTLIETHA NLRILSRKCL 240 RQLSKMVAGF QTLCLTILHL NLTTFDTLIL YSISAKVEEG CQLTSADDIA SAVHHMIRII 300 EEEASLC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	81	87	RKKRRRR
2	82	87	KKRRRR
3	101	112	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	1e-69	bHLH family protein