PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028125325.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 102aa    MW: 11671.6 Da    PI: 10.0394
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028125325.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.21.6e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rgrWT+eEde+l ++++  G g+W++ ++  g+ R++k+c++rw +yl
   XP_028125325.1 14 RGRWTAEEDEILTKYIQANGEGSWRSMPKNAGLLRCGKSCRLRWINYL 61
                     8*******************************99************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    
MGRAPCCEKV GLKRGRWTAE EDEILTKYIQ ANGEGSWRSM PKNAGLLRCG KSCRLRWINY  60
LRSDLKRGNI SSEEEEIITK LHSTLGNRLV QHSLIIFPTK IL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49330.13e-54MYB family protein