PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028125498.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 349aa MW: 39225 Da PI: 6.0541

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028125498.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.5	1.1e-08	186	233	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ +L+ l+P + +k a +L + ++Y++sLq XP_028125498.1 186 SHSLAERVRREKISERMKQLQALVPGC----DKVTGNALVLDEIINYVQSLQ 233 8***********************9....455999************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MAAFSFQHQP SLLDPTFLPD SSAFSQEPNT TPTTNCFSQF YRLESPQQIP VDVCFHESSC 60 LENGTKVGIR HNNEPSVTNK HSTDSSSMVD KSESGEQATQ KVIVIAKKRK SMDGSSITSL 120 QSMEAREVKS NKEKRSNGTI TTMTDEKVII KKPKADKQKD QKKVRPEEVP NGYNHVRAKR 180 GQATDSHSLA ERVRREKISE RMKQLQALVP GCDKVTGNAL VLDEIINYVQ SLQYQVEFLS 240 SKLASVNPMF CDFGTELDAF MVPHETWMSS QEESPLPNVP QCNSPQFAIP NSYPLLDSSS 300 SSLLFDHQQV QMPDILPQDN GQLLWEVDDQ KQKLIDQSGS FTNNLCYFH

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MAAFSFQHQP SLLDPTFLPD SSAFSQEPNT TPTTNCFSQF YRLESPQQIP VDVCFHESSC  60
LENGTKVGIR HNNEPSVTNK HSTDSSSMVD KSESGEQATQ KVIVIAKKRK SMDGSSITSL  120
QSMEAREVKS NKEKRSNGTI TTMTDEKVII KKPKADKQKD QKKVRPEEVP NGYNHVRAKR  180
GQATDSHSLA ERVRREKISE RMKQLQALVP GCDKVTGNAL VLDEIINYVQ SLQYQVEFLS  240
SKLASVNPMF CDFGTELDAF MVPHETWMSS QEESPLPNVP QCNSPQFAIP NSYPLLDSSS  300
SSLLFDHQQV QMPDILPQDN GQLLWEVDDQ KQKLIDQSGS FTNNLCYFH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	107	134	KKRKSMDGSSITSLQSMEAREVKSNKEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	8e-49	bHLH family protein