PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028125499.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 327aa    MW: 36863.1 Da    PI: 5.411
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028125499.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.71e-08164211455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++ +L+ l+P +    +k    a +L + ++Y++sLq
  XP_028125499.1 164 SHSLAERVRREKISERMKQLQALVPGC----DKVTGNALVLDEIINYVQSLQ 211
                     8*************************9....455999**************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MAAFSFQHQP SLLDPTFLPD SSAFSQEPNT TPTTNCFSQF YRLESPQQIP VDVCFHESSC  60
LENGTKVGIR HNNEPSVTNK HSTDSSSMVD KSESGEQATQ KEAREVKSNK EKRSNGTITT  120
MTDEKVIIKK PKADKQKDQK KVRPEEVPNG YNHVRAKRGQ ATDSHSLAER VRREKISERM  180
KQLQALVPGC DKVTGNALVL DEIINYVQSL QYQVEFLSSK LASVNPMFCD FGTELDAFMV  240
PHETWMSSQE ESPLPNVPQC NSPQFAIPNS YPLLDSSSSS LLFDHQQVQM PDILPQDNGQ  300
LLWEVDDQKQ KLIDQSGSFT NNLCYFH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.25e-48bHLH family protein