PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028125520.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 239aa MW: 27433.9 Da PI: 5.9791

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028125520.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.3	5.7e-08	170	197	4	31
HHHHHHHHHHHHHHHHHHHHHCTSCCC. CS HLH 4 ahnerErrRRdriNsafeeLrellPkas 31 +h+ +Er RR++iN+++ +L+ ++P ++ XP_028125520.1 170 KHSLAERVRREKINNRLKRLQIIVPGCY 197 79***********************974 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MDDFRQQQLE SFSPSYAASY TDMKYMEIMD HLTEPNSTMF ENFNMTDMLE ESFMVDHQQP 60 EIQGTNFKIL PCTFESNCMN TVPVFLDMAT SSNTEDVFHE KKKRKVMEQS SSNSINMSST 120 VPGNGWKVKN DTMKKNSSGK GKKSMDYEKE ADESEEVIHV KARRGKATDK HSLAERVRRE 180 KINNRLKRLQ IIVPGCYKNQ VEFLSMELAA ASSLYDFNLD AEVISNSAGD KIHMRQGSW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	101	106	KKKRKV
2	101	129	KKKRKVMEQSSSNSINMSSTVPGNGWKVK
3	102	130	KKKRKVMEQSSSNSINMSSTVPGNGWKVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25330.1	8e-27	bHLH family protein