PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028125690.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Dof
Protein Properties Length: 254aa    MW: 27590.4 Da    PI: 7.4629
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028125690.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof112.61.8e-3552108359
          zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 
                      + l+cprC s+ntkfCyynny+ sqPr+fCkaC+r+WtkGG+lrnvPvGggr++++
  XP_028125690.1  52 PEPLPCPRCGSSNTKFCYYNNYNKSQPRHFCKACKRHWTKGGTLRNVPVGGGRKNKR 108
                     67899**********************************************976554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MGLSTKQVSG DGFDWGHSLL QSDNSLELVP KPPPPPPPAT AAGRQPPQQP PPEPLPCPRC  60
GSSNTKFCYY NNYNKSQPRH FCKACKRHWT KGGTLRNVPV GGGRKNKRLK TATATATASG  120
TTTTSRSNNS HMGIHQKNIS EFLYQGLTHE YSMNDDFLSS FESNPSSISA SFRCSDAYDY  180
TGGLDFAITT ATTSAPATSS GSQPWQVVPT TTRGGGDGGV MDTSNYWNWD DFESLVSSTE  240
INIPWEDDDT KIKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28310.26e-26Dof family protein