PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028125701.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 372aa MW: 43116.2 Da PI: 8.2469

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028125701.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	78.3	1.5e-24	25	114	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r++ +k+k ++++++r +v +keg+r+ +k++ ++++raetrtgC+a+l vk+++ +gk++vt+++++HnH+l+ XP_028125701.1 25 DFYNTYGGRMGFSIRRDFCRKNKVTKQVICRLLVYNKEGFRKGDKRD-PLSKNPRAETRTGCEARLYVKLDDnTGKYVVTDFKEKHNHDLV 114 6*****************************************999.999****************99**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MEPENDCAWK PKQGMTFDSE QCVYDFYNTY GGRMGFSIRR DFCRKNKVTK QVICRLLVYN 60 KEGFRKGDKR DPLSKNPRAE TRTGCEARLY VKLDDNTGKY VVTDFKEKHN HDLVSPECAH 120 MLPSQRKIST TQAIQLDLAA QSGLCLSQSF ELMGREAGGR QCLGFTKLDS KNYLRTKRQQ 180 SLAYGEVGNV LQYFKEKSLQ NPSFFYAFQL DNEEKITNMF WADAQMIMDY AQFGDVVTFD 240 TTYKLNKEHR PFASFVGFNH HRETVIFGAA LLYDKTAESF VWFFQNFLEA VSGKAPKNLF 300 TDQDAAMAKV IPIVMPDTTH RLCTWHLMQN ALKHVNCLFQ DKGVKGVLNK FFFDIEDANQ 360 WKLEWTEMLD KL

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MEPENDCAWK PKQGMTFDSE QCVYDFYNTY GGRMGFSIRR DFCRKNKVTK QVICRLLVYN  60
KEGFRKGDKR DPLSKNPRAE TRTGCEARLY VKLDDNTGKY VVTDFKEKHN HDLVSPECAH  120
MLPSQRKIST TQAIQLDLAA QSGLCLSQSF ELMGREAGGR QCLGFTKLDS KNYLRTKRQQ  180
SLAYGEVGNV LQYFKEKSLQ NPSFFYAFQL DNEEKITNMF WADAQMIMDY AQFGDVVTFD  240
TTYKLNKEHR PFASFVGFNH HRETVIFGAA LLYDKTAESF VWFFQNFLEA VSGKAPKNLF  300
TDQDAAMAKV IPIVMPDTTH RLCTWHLMQN ALKHVNCLFQ DKGVKGVLNK FFFDIEDANQ  360
WKLEWTEMLD KL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-81	FAR1 family protein