PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028125759.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 253aa    MW: 27720.2 Da    PI: 10.3094
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028125759.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.76.4e-14110154347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +W++eE+ +++ + ++lG+g+W+ I+r + ++Rt+ q+ s+ qky
   XP_028125759.1 110 PWSEEEHRIFLVGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKY 154
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MGRKCSHCGN IGHNSRTCTT HNNQKITLVG GLKLFGVQLH ISSSSSSIAM KKSSSMDCFP  60
ASSSTPSSSS SSTTSLQLLS TDENSAKIAP NGYLSEGLVR RTQERKKGVP WSEEEHRIFL  120
VGLEKLGKGD WRGISRNFVT TRTPTQVASH AQKYFLRQIS LQKNKRRPSL FDESQKTNGC  180
YVMDFHSHEE QASKASQPSM PVWLHGSIFE SQTTVENQAP DLELKLAAPR PLNQQSKSPS  240
RGAGLFAGPI SVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.12e-50MYB_related family protein