PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028125854.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family LBD
Protein Properties Length: 214aa    MW: 23702.6 Da    PI: 8.2899
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028125854.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26095.36.5e-306107197
          DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                     +C++C+vlr++C+++C+l++ +      ++q++++ +v+k+FG++ ++++l+++p+++r+++++sl++eA+ r+ +Pv+Gavg++++++++++q+
  XP_028125854.1   6 SCNGCRVLRKGCNDNCILRQSIqgietSQAQANATVFVAKFFGRAGLMSFLSSVPDSQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQA 100
                     6*********************9998777889*************************************************************** PP

          DUF260  91 kaelall 97 
                     ++e++l+
  XP_028125854.1 101 AVETVLR 107
                     *999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MCREMSCNGC RVLRKGCNDN CILRQSIQGI ETSQAQANAT VFVAKFFGRA GLMSFLSSVP  60
DSQRPALFQS LLFEACGRTV NPVNGAVGLL WTGNWHVCQA AVETVLRGGA LRPIPEFSGA  120
SPADEFDDAS NTNNHNIDFF RSRDLYLARK AKNNNELMIT ARQQPASGDL DDFPARMRAK  180
RRAETPSLNS EESETTTLES ERFGFTRRKR NEGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67420.11e-69LBD family protein