PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028125855.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

C2H2

Protein Properties

Length: 252aa MW: 26591.5 Da PI: 7.8502

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028125855.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14	0.00014	90	112	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k Fs+ L H +H XP_028125855.1 90 YKCSVCDKAFSSYQALGGHKASH 112 9***********99999998887 PP
2	zf-C2H2	14.5	0.00011	147	169	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+ksF++ L H r+H XP_028125855.1 147 HECSICHKSFPTGQALGGHKRRH 169 78*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
MALEALNSPT TAAPPPPYFD DMDLHCLEPW TKRKRSKRSR SENPPTEEEY LALCLIMLAR 60 GGSTASSSSS AAATATTDRH TLSPPPPASY KCSVCDKAFS SYQALGGHKA SHRKLAASAA 120 AAATTSDDHP STSAASATTL NPSGRTHECS ICHKSFPTGQ ALGGHKRRHY DGGNNNSTTN 180 ANGGAGSGVT SSEGAGSSHV HREFDLNLPA LPEFFPGLRV DCVRKSQLSG EQEVESPLPM 240 KKPRLSLMSD LD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27730.1	8e-52	C2H2 family protein