PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028125878.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 326aa    MW: 36013.4 Da    PI: 4.5057
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028125878.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.11e-102522921055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  XP_028125878.1 252 RKRRERINERLKILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 292
                     9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MEAMPEIEWN GFNTGMYCSE EEDFMAQLLG NCSLPNELPG ISSFGVPSES AMNFSVTYSS  60
SDNSINPNVY SFSQESSYNY RYQELSDHSH RFLAMNDSSM SIDTGSPVEV YTDNLMEGDD  120
EIIREPEMAA VPETSSEEKS DSLQPENSSK KRSRVSGDVQ RKRNVKSRKN QKVVSGNNNN  180
EDNNNNGGGI NNQASSSCSS EDAQYSNGSQ EQQNGGMTTS SSSKGAAATL NLNGKSRASR  240
GSATDPQSLY ARKRRERINE RLKILQNLVP NGTKVDISTM LEEAVQYVKF LQLQIKLLSS  300
DDLWMYAPIA YNGMDNGLDL KIPSPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.12e-64bHLH family protein