PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028125950.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 558aa MW: 62435.5 Da PI: 4.53

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028125950.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.5	5.5e-53	12	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdeelv +yLk+kv +k++++ e+i+++d+yk+ePwdLp k ++k+++ ewyfFs dkky +g+r+nrat +gyWk+tgkd++v+ XP_028125950.1 12 LAPGFRFHPTDEELVRYYLKRKVCRKPFRF-EAISDIDVYKSEPWDLPgKsRLKSRDLEWYFFSVLDKKYGNGSRTNRATGRGYWKTTGKDRPVH 105 579***********************99.89***********6347777888*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + k+++vg+kktLv+++grap+g +t+Wvmheyrl XP_028125950.1 106 H-KSRTVGMKKTLVYHSGRAPRGDRTNWVMHEYRL 139 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 558 aa Download sequence
MGSDPASSTA SLAPGFRFHP TDEELVRYYL KRKVCRKPFR FEAISDIDVY KSEPWDLPGK 60 SRLKSRDLEW YFFSVLDKKY GNGSRTNRAT GRGYWKTTGK DRPVHHKSRT VGMKKTLVYH 120 SGRAPRGDRT NWVMHEYRLV DEELEKAGIA QDSFVLCRIF QKSGSGPKNG EQYGAPFIEE 180 EWEDDELVMI PGEEAADEVA VHDDAYRDGI DLEQILDADI PLEHVPLPLS FNYEDNSSHV 240 QKPVDFVDHA QKLLVGMGES YCVPEQPDGQ NLFDLPVQKD MDAESVKHEN IGEASYSVNA 300 VDEDYLLDEP FFDATGNTLF DDGGAMFTND LSNPIEADPS GFDMVEEYLK YFDADDSNLQ 360 FVDSDSLKMM GSENLVSDQA FLTQKHVNGG AQEENMGSQQ LLQGQDNDFA STSKQNPGNF 420 GSDIQHPFMK QASRMLGSIP APPAFASEFP AKDVAFQLNS ASQSSSEVHF TAGMIQLRNM 480 TLSQGYWSLG KHTDVNMILT FGPPHNDSTS ASSDRMANMP LGKAGSSMSR CWFYLMFAWI 540 LIISMSFKIG AYIYTGNA

Sequence ? help Back to Top

Protein Sequence Length: 558 aa Download sequence

MGSDPASSTA SLAPGFRFHP TDEELVRYYL KRKVCRKPFR FEAISDIDVY KSEPWDLPGK  60
SRLKSRDLEW YFFSVLDKKY GNGSRTNRAT GRGYWKTTGK DRPVHHKSRT VGMKKTLVYH  120
SGRAPRGDRT NWVMHEYRLV DEELEKAGIA QDSFVLCRIF QKSGSGPKNG EQYGAPFIEE  180
EWEDDELVMI PGEEAADEVA VHDDAYRDGI DLEQILDADI PLEHVPLPLS FNYEDNSSHV  240
QKPVDFVDHA QKLLVGMGES YCVPEQPDGQ NLFDLPVQKD MDAESVKHEN IGEASYSVNA  300
VDEDYLLDEP FFDATGNTLF DDGGAMFTND LSNPIEADPS GFDMVEEYLK YFDADDSNLQ  360
FVDSDSLKMM GSENLVSDQA FLTQKHVNGG AQEENMGSQQ LLQGQDNDFA STSKQNPGNF  420
GSDIQHPFMK QASRMLGSIP APPAFASEFP AKDVAFQLNS ASQSSSEVHF TAGMIQLRNM  480
TLSQGYWSLG KHTDVNMILT FGPPHNDSTS ASSDRMANMP LGKAGSSMSR CWFYLMFAWI  540
LIISMSFKIG AYIYTGNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-147	NAC family protein