PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028125966.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 245aa    MW: 28195.6 Da    PI: 6.965
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028125966.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR149.31.6e-1548135191
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     +fY +YAk++GF +  ++++  + +g+++     C++  kr+++++   +  +++ +++++Cka+++  ++ dg++++t+++l+H+H+l p
  XP_028125966.1  48 EFYAKYAKNLGFAIAYRTQNV-RSDGKVKYFGIECTQAQKRTKRSEV--NPLKPSLSSKIDCKARIRAILQPDGRYKLTTVVLDHTHDLIP 135
                     6*************9887665.48999***********999998876..9999***********************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MDIDSNHPTL SGGEEVEEAE NNPTLNESEE IEEPKKGMWF TSKQEVHEFY AKYAKNLGFA  60
IAYRTQNVRS DGKVKYFGIE CTQAQKRTKR SEVNPLKPSL SSKIDCKARI RAILQPDGRY  120
KLTTVVLDHT HDLIPSDSRH FPMNKRIRTP VKRRLEINDE AGIGVSRNFH SIVVEAGGYE  180
ALTFDERDVR NHIENARRLR LGVGDAESVA FYFHRMQQEN SNFYSAIDFD VDGRIRNLFW  240
ADAKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.11e-30FAR1 family protein