PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028125975.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 225aa    MW: 24727.3 Da    PI: 4.8585
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028125975.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.55.8e-1756106155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr +  +g+Wv+eIr+p++   + r++lg+f  +e+Aa+a++ a+++ +g
  XP_028125975.1  56 PVYRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFSNPEMAARAHDVAALSVKG 106
                     68*****998.**********843...6**********************98766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MMSDAPNSET ESTSNSFSPP PSSPSSSTCL NPTTPDPNPK NRPKRNRDSN NNNKHPVYRG  60
VRMRAWGKWV SEIREPRKKS RIWLGTFSNP EMAARAHDVA ALSVKGKSAI LNFPELAPFL  120
PRPDTCSPRD VQAAAAKAAS MDHLGVPTTT SSSSSSEETE ELTEIVELPS LGTSYESAAE  180
SRGELVYVDS VVDVEEWWWL DEDHGCFAAE SSVISGGFET FLWQH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.12e-46ERF family protein