PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028126030.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 328aa MW: 38037.4 Da PI: 6.9313

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028126030.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.6	7.9e-27	25	114	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r+++ kk k +++ ++r +vC+keg+r+ +k++ ++++raetrtgC+a+l +k+++ +gk++vt+++++HnH+l+ XP_028126030.1 25 EFYNTYGGRMGFSIRRDYCKKDKFTNQLIHRLLVCNKEGFRKVDKRD-PLSKNSRAETRTGCEARLYIKLHDgTGKYVVTDFKEKHNHDLV 114 6*****************************************999.9999***********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MEPENDCDWK PKLGMIFDSE QCAYEFYNTY GGRMGFSIRR DYCKKDKFTN QLIHRLLVCN 60 KEGFRKVDKR DPLSKNSRAE TRTGCEARLY IKLHDGTGKY VVTDFKEKHN HDLVSPECAH 120 MLPSQRKISA TQAIQLDLEA QSGLRLGQSF ELMGREAGGR QCLDNEEQIT NMFWADAQMI 180 MDYAQFGDVV TFDTTYKLNK EHRPFASYVG FNYHRETVIF GAALLYDETA ESFVWLFENF 240 LEAMSRKAPK TLFIDQDVAM AKAIPIVMPD TSHRLCTWHL MQNALKHVNC LFQDKEVKGV 300 LDKFFFHILI SFYDMYGSCS STIAHSRF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-59	FAR1 family protein