PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028126585.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 691aa MW: 79314.4 Da PI: 8.7009

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028126585.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	44.7	4.4e-14	48	134	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +YAk++GF + ++++ ++ge++ C++ kr+++++ + +++ ++ ++Ckak++ +++kdg++++t+++leH+H+l XP_028126585.1 48 SFYAKYAKHLGFAIAYRTQNIG-QDGEVKYFGIECTRACKRTKRSEV--HPFEPSLSSFIECKAKVRATLQKDGRFKLTTVVLEHTHDLI 134 5***********99988876.8999***********99877..9999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 691 aa Download sequence
MDIDSNNPSL NGTEEVEEAE NNPSLNEIGE VEQPKKGMYF NSKQEAYSFY AKYAKHLGFA 60 IAYRTQNIGQ DGEVKYFGIE CTRACKRTKR SEVHPFEPSL SSFIECKAKV RATLQKDGRF 120 KLTTVVLEHT HDLIPTDSRH FAMNKRIVTP VKRRLEINDE AGIGVAKNFH SIVVEAGGYE 180 ALTFDERDTR NHIESMRRLR LGVGDAESIA LYFHRMQQQN SNFYSAIDLD EDGSMRNLFW 240 ADAKSRVVYK AFGDVVSFDT TYLTNKYDMP FAPFVGVNHH GQSILLGCGL LSNEDTETFV 300 WLFKEWLSCM SDAPPKAIIT DQCRAMQNAI EVVFPQARHR WCLWHIMKKI PEKLGGYAQY 360 ESIKFALQNA IYDSFTKDEF DEEWQAMIAK FNLDDNDWFG VLYSERHRWI PAYAKDVFWA 420 SMSTTQRSES MNAFFDGYVN LKTTLKQFVE QYDNALRSKV EKEMKADFKS RNKLYDCLTM 480 YEFEKQFRAA YTNAKFKEVQ VELKRLLYCR ANLVKEEGAI CTYHVKEAVL VGEKMKTVEF 540 VVYFNASECE MQYIVRGYTC IPTTYTKAGA VVNAKLHDIY HKMLDKILEI AANDNGKHEV 600 LDLGLIEIKD RVRKDQSSSA SHVPPSTSNA LPSHSSPKSP SARSTTKASM SRKMLSPVVA 660 RRRGRPCTKR KVSKVDEVVN RKLKSKRPLK A

Sequence ? help Back to Top

Protein Sequence Length: 691 aa Download sequence

MDIDSNNPSL NGTEEVEEAE NNPSLNEIGE VEQPKKGMYF NSKQEAYSFY AKYAKHLGFA  60
IAYRTQNIGQ DGEVKYFGIE CTRACKRTKR SEVHPFEPSL SSFIECKAKV RATLQKDGRF  120
KLTTVVLEHT HDLIPTDSRH FAMNKRIVTP VKRRLEINDE AGIGVAKNFH SIVVEAGGYE  180
ALTFDERDTR NHIESMRRLR LGVGDAESIA LYFHRMQQQN SNFYSAIDLD EDGSMRNLFW  240
ADAKSRVVYK AFGDVVSFDT TYLTNKYDMP FAPFVGVNHH GQSILLGCGL LSNEDTETFV  300
WLFKEWLSCM SDAPPKAIIT DQCRAMQNAI EVVFPQARHR WCLWHIMKKI PEKLGGYAQY  360
ESIKFALQNA IYDSFTKDEF DEEWQAMIAK FNLDDNDWFG VLYSERHRWI PAYAKDVFWA  420
SMSTTQRSES MNAFFDGYVN LKTTLKQFVE QYDNALRSKV EKEMKADFKS RNKLYDCLTM  480
YEFEKQFRAA YTNAKFKEVQ VELKRLLYCR ANLVKEEGAI CTYHVKEAVL VGEKMKTVEF  540
VVYFNASECE MQYIVRGYTC IPTTYTKAGA VVNAKLHDIY HKMLDKILEI AANDNGKHEV  600
LDLGLIEIKD RVRKDQSSSA SHVPPSTSNA LPSHSSPKSP SARSTTKASM SRKMLSPVVA  660
RRRGRPCTKR KVSKVDEVVN RKLKSKRPLK A

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	661	684	RRRGRPCTKRKVSKVDEVVNRKLK
2	665	675	RPCTKRKVSKV
3	680	687	NRKLKSKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-110	FAR1 family protein