PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028126601.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family LBD
Protein Properties Length: 161aa    MW: 16990.4 Da    PI: 8.743
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028126601.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26035.23.4e-11581025599
          DUF260  55 edamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 
                     ++ + sl+yeA+ r+ +P+yGa+g++++++++l+++++e++l ++
  XP_028126601.1  58 PRFFGSLLYEACGRIVNPIYGAAGLLWSGNWHLCHAAVEAVLHGS 102
                     67889*********************************9988765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MDAESFAKAA AITAPYDPAY CGSKPLNPKP TPPSSSPSST AVPASKTSSM LAPITSVPRF  60
FGSLLYEACG RIVNPIYGAA GLLWSGNWHL CHAAVEAVLH GSPIVQLSPD SELSTMSPPL  120
KACDIRHVSK DESSAASRDL HKVKCRSQFK RAAGKPKVEV D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02550.12e-32LBD family protein