PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028126723.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 296aa    MW: 31695.7 Da    PI: 5.6191
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028126723.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.11e-10145189554
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     h+++Er RR+ri +++  L+el+P++      K +Ka++L +  +Y+k L
  XP_028126723.1 145 HSIAERLRRERISERMKALQELVPSC-----NKTDKAAMLDEILDYVKFL 189
                     99***********************8.....6****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MATNPSEGYS DEFLDQILSI PSYAGLAGAE TTPSQLNSAS AAAAAAAAGR SGFQQQFVPL  60
GLSLDNGRDD LSGGGGAFSV KNERESVNMA SLFPAFQHLQ PHSVRQAVPQ AFHGQPTPST  120
TITVPQPPGI RPRVRARRGQ ATDPHSIAER LRRERISERM KALQELVPSC NKTDKAAMLD  180
EILDYVKFLR LQVKVLSMSR LGGAGAVAQL VADVPLSSIE GEDSEGGCNQ SAWDKWSNHD  240
IEQEVAKLME EDVGTAMQYL QSKALCIMPI SLAAVIYPTH SSDVPPHVKP EPNGPS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1150155RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.27e-72bHLH family protein