PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028126747.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 401aa MW: 46733.8 Da PI: 5.9189

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028126747.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	86.4	4.2e-27	36	124	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYneY++ vGFs+r+++ +ks+++g +t+r+fvC keg++e++k+ + +++r+etrt+Cka ++++ ++ +kw v+k++++HnH+l XP_028126747.1 36 EFYNEYGRIVGFSIRRDYCNKSQKDGVMTSRKFVCCKEGESEKDKRY-TMIKNPRSETRTNCKAFMHISFKRdLSKWIVSKFDSNHNHPL 124 6****************************************9999.99***************999799***********99 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MDDSRLEGCI EEMGELAKDK SPYLGMEFPS EEAAYEFYNE YGRIVGFSIR RDYCNKSQKD 60 GVMTSRKFVC CKEGESEKDK RYTMIKNPRS ETRTNCKAFM HISFKRDLSK WIVSKFDSNH 120 NHPLHLPQCT HLMPSQRKVC DAQGINIDIA DESGISLKAS HDLISAIAGG KEFVGFTRED 180 QKTYLRAKRQ RNLQYGEAGS LLRYFQQQVA ENPYFYYAIQ LDVDEMITNI FWANHQMITD 240 YGLFGDAVSF DTTFQTNKEY HPLALFSGFN HFRMTVIFGA ALLYDETTES FEWLFETFFD 300 AMSGKKPVSF FTDQDQAMAK AISQIMPEVF HGLCTFHLMQ NALKHLGYLF KSDSKFSSDL 360 KACIYDYENE HELIEAWNSL IDKYNLQENE WMKGTWRKRE Q

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MDDSRLEGCI EEMGELAKDK SPYLGMEFPS EEAAYEFYNE YGRIVGFSIR RDYCNKSQKD  60
GVMTSRKFVC CKEGESEKDK RYTMIKNPRS ETRTNCKAFM HISFKRDLSK WIVSKFDSNH  120
NHPLHLPQCT HLMPSQRKVC DAQGINIDIA DESGISLKAS HDLISAIAGG KEFVGFTRED  180
QKTYLRAKRQ RNLQYGEAGS LLRYFQQQVA ENPYFYYAIQ LDVDEMITNI FWANHQMITD  240
YGLFGDAVSF DTTFQTNKEY HPLALFSGFN HFRMTVIFGA ALLYDETTES FEWLFETFFD  300
AMSGKKPVSF FTDQDQAMAK AISQIMPEVF HGLCTFHLMQ NALKHLGYLF KSDSKFSSDL  360
KACIYDYENE HELIEAWNSL IDKYNLQENE WMKGTWRKRE Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-83	FAR1 family protein