PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028126797.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family HB-other
Protein Properties Length: 163aa    MW: 18840.3 Da    PI: 7.0727
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028126797.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox451.8e-143086557
                    SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  5 ttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                     ++t+eq+e+Le++F+++++p+ ++  e+ +      +++ +q+kvWFqN+R  ek+
  XP_028126797.1 30 MQYTTEQVEVLEKVFAECPNPTFSHQWEMIRDHpilsNIEPKQIKVWFQNHRCLEKQ 86
                    679*******************76555555555599****************99886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MERMGASHGG CSSRRCDVSG DPQEKCGKYM QYTTEQVEVL EKVFAECPNP TFSHQWEMIR  60
DHPILSNIEP KQIKVWFQNH RCLEKQKKEA TNIQLVNKKL TAANRLLKEE NDCLQKQVSH  120
LVYENEYMWQ QLKNESPATT DTSCEFAINS PQHSLRAAND PKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32880.14e-50HD-ZIP family protein