PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028127123.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 632aa MW: 74057.5 Da PI: 7.691

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028127123.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74.7	1.9e-23	31	119	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y ++GFs+r+ + +ks ++g+it+r+fvC+keg+r +k++ ++++r+e rtgC+a+l++k ++ +k+ v++++++HnH ++ XP_028127123.1 31 DFYNTYRGKLGFSIRRGYVNKS-KEGQITSRQFVCNKEGFRVVDKRD-PLTKNPRQEVRTGCQARLVIKWDRnIQKFFVSDFVEQHNHIFV 119 6******************9.6666************9999.999**************99989************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 632 aa Download sequence
MEPDNHENDG GECDWKPRVP MTFDKEQEAY DFYNTYRGKL GFSIRRGYVN KSKEGQITSR 60 QFVCNKEGFR VVDKRDPLTK NPRQEVRTGC QARLVIKWDR NIQKFFVSDF VEQHNHIFVP 120 AKCTHMLPSQ RNISASQATE IDLAEKSGIR LNAAFELMGN EVGGRALGFT KLDPKNYLRT 180 KRQNSLAYGE AGSILQYFRN KSLENPSFFY SVQLDNEEQI TNIFWADAQM IMDYGQFGDV 240 VTFDTTYKLN SAHKPFASFV GFNHHRETVI FVAALMYDET ADSFVWLFRR FLEAMSSKAP 300 KIIFTDQDAV MAKAIPIVMP NTTHRLCTWH LIQNALRHAN SIFKDKAMKD KGMKSVLYTF 360 MYDIEDEEEF MLKWEEMLDK YEVRDNHWLK LTFGVKEKWG WPYVRNAWGA GMSNTQLSES 420 FNAFLKDFIQ SDHNLMQFFM HFDRVLSEKR YKELQAEYIL CQKLPRVNIK VKIMEQAADV 480 YTNKIFEEFQ DEYVKSLEVN IEEIENDGES IVYTVLDSDG IKVRKVRQEC DDSVTCNCRK 540 FEMKGILCSH CLKILRERLK LKEIPSQYIL KRWTKKARSE NVKDKCGHDI QVDVRLHQTS 600 RYRSLMAIFR SIACRASESE ETYNLTVEKA EN

Sequence ? help Back to Top

Protein Sequence Length: 632 aa Download sequence

MEPDNHENDG GECDWKPRVP MTFDKEQEAY DFYNTYRGKL GFSIRRGYVN KSKEGQITSR  60
QFVCNKEGFR VVDKRDPLTK NPRQEVRTGC QARLVIKWDR NIQKFFVSDF VEQHNHIFVP  120
AKCTHMLPSQ RNISASQATE IDLAEKSGIR LNAAFELMGN EVGGRALGFT KLDPKNYLRT  180
KRQNSLAYGE AGSILQYFRN KSLENPSFFY SVQLDNEEQI TNIFWADAQM IMDYGQFGDV  240
VTFDTTYKLN SAHKPFASFV GFNHHRETVI FVAALMYDET ADSFVWLFRR FLEAMSSKAP  300
KIIFTDQDAV MAKAIPIVMP NTTHRLCTWH LIQNALRHAN SIFKDKAMKD KGMKSVLYTF  360
MYDIEDEEEF MLKWEEMLDK YEVRDNHWLK LTFGVKEKWG WPYVRNAWGA GMSNTQLSES  420
FNAFLKDFIQ SDHNLMQFFM HFDRVLSEKR YKELQAEYIL CQKLPRVNIK VKIMEQAADV  480
YTNKIFEEFQ DEYVKSLEVN IEEIENDGES IVYTVLDSDG IKVRKVRQEC DDSVTCNCRK  540
FEMKGILCSH CLKILRERLK LKEIPSQYIL KRWTKKARSE NVKDKCGHDI QVDVRLHQTS  600
RYRSLMAIFR SIACRASESE ETYNLTVEKA EN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-123	FAR1 family protein