PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028127574.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family AP2
Protein Properties Length: 176aa    MW: 20089 Da    PI: 10.6095
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028127574.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.15.9e-1568127155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s+++GV++++++gr++A+++d  s+n    k+ k+++lg +  +e Aa+a++ a+ k++g
  XP_028127574.1  68 SRFRGVSRHRWTGRFEAHLWDkGSWNAtqrKKgKQVYLGAYNVEETAARAYDLAAIKYWG 127
                     789******************999988876447*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MGMVTTVKSE MRPLKHHLCS MEVHPPVVVK SVKRHKRESC AFVIGEQPQP QPGQVFPSTT  60
TTGLKRSSRF RGVSRHRWTG RFEAHLWDKG SWNATQRKKG KQVYLGAYNV EETAARAYDL  120
AAIKYWGPTT FTNFSVSDYE IEMEIMQNVT KEEYLASLRR KSSGFSRGVS KYRGVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.32e-57AP2 family protein