PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028127583.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 479aa MW: 55870.2 Da PI: 6.6129

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028127583.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	78.1	1.7e-24	28	118	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 +fYn+Y+ +vGFs+rk++++k+++++eit+rtfvC+keg+r +k++ +++r+ r+gC a++ +k+++ +gk+ +++++HnH+l+p XP_028127583.1 28 DFYNTYGGKVGFSIRKAYENKNRQTKEITSRTFVCYKEGSRGIDKRD-PLVKNPRQAVRCGCGARFSIKLDRiSGKYIACDFVEHHNHDLVP 118 6*****************************************999.99999**********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MEENNIVDDC GWKPKVRMPF DSEPAAYDFY NTYGGKVGFS IRKAYENKNR QTKEITSRTF 60 VCYKEGSRGI DKRDPLVKNP RQAVRCGCGA RFSIKLDRIS GKYIACDFVE HHNHDLVPEN 120 CIHMLPSQRK ISTTQAIEVE LASQSGIPLR SAYELFGRES GGRASLGFTK LDQKNYLRSK 180 RQKDLEYGEA GSMLHYFRKK TVENSSFFYA VQLDYDEQIS DIFWADAQMI MDFAQFGDVV 240 TFDTTYKLNN EHRPFGSFVG FNHHRETIIF GAALMYDETA ESFTWLFQFF LEAMSNKAPK 300 TIFTDQDAAM AKAIPIVIPD TNHRLCTWHL MQNAVKHVSS VFDDVGVKGV FSKFMHDIDD 360 EEEFRIQWDQ MLDKYDAFDN HWLKQTFRVK EKWGWPYIMN SWAAGMSTTQ LSESFNAFLK 420 DYLNCDHNLM EFVKHFERVL YEKRYKELEA EYNLSQKLPR VSILCDVKAS GRDLHENYF

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MEENNIVDDC GWKPKVRMPF DSEPAAYDFY NTYGGKVGFS IRKAYENKNR QTKEITSRTF  60
VCYKEGSRGI DKRDPLVKNP RQAVRCGCGA RFSIKLDRIS GKYIACDFVE HHNHDLVPEN  120
CIHMLPSQRK ISTTQAIEVE LASQSGIPLR SAYELFGRES GGRASLGFTK LDQKNYLRSK  180
RQKDLEYGEA GSMLHYFRKK TVENSSFFYA VQLDYDEQIS DIFWADAQMI MDFAQFGDVV  240
TFDTTYKLNN EHRPFGSFVG FNHHRETIIF GAALMYDETA ESFTWLFQFF LEAMSNKAPK  300
TIFTDQDAAM AKAIPIVIPD TNHRLCTWHL MQNAVKHVSS VFDDVGVKGV FSKFMHDIDD  360
EEEFRIQWDQ MLDKYDAFDN HWLKQTFRVK EKWGWPYIMN SWAAGMSTTQ LSESFNAFLK  420
DYLNCDHNLM EFVKHFERVL YEKRYKELEA EYNLSQKLPR VSILCDVKAS GRDLHENYF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-104	FAR1 family protein